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GM27411
LCL
from
B-Lymphocyte
Description:
RETT SYNDROME, CONGENITAL VARIANT
FORKHEAD BOX G1; FOXG1
Affected:
Yes
Sex:
Female
Age:
15
YR
(At Sampling)
Sample Description
Overview
Characterizations
Phenotypic Data
External Links
Culture Protocols
Overview
Repository
NIGMS Human Genetic Cell Repository
Subcollection
Heritable Diseases
FOXG1
PIGI Consented Sample
Biopsy Source
Peripheral vein
Cell Type
B-Lymphocyte
Tissue Type
Blood
Transformant
Epstein-Barr Virus
Sample Source
LCL from B-Lymphocyte
Race
White
Country of Origin
CANADA
Family History
N
Relation to Proband
proband
Species
Homo
sapiens
Common Name
Human
Remarks
See Phenotypic Data tab.
Characterizations
IDENTIFICATION OF SPECIES OF ORIGIN
Species of Origin Confirmed by LINE assay
Gene
FOXG1
Chromosomal Location
14q12
Allelic Variant 1
164874.0007
; RETT SYNDROME, CONGENITAL VARIANT
Identified Mutation
c.460dupG (p.Glu154Glyfs*301)
; In 2 unrelated patients with the congenital variant of Rett syndrome (613454), Kortum et al. (2011) identified a heterozygous de novo 1-bp duplication (460dupG), resulting in a duplication of guanine after 7 subsequent guanine nucleotides in the FOXG1 gene. The recurrence of this mutation suggested that this guanine stretch is prone to replication errors, thus representing a mutation hotspot.
Phenotypic Data
Demographic Data
Relation to Proband
proband
Age at Sampling
15 YR
Sex
Female
Age of Onset(If not a control)
5 MO
Age at Diagnosis(If not a control)
11 YR
Racial Category
White
Country
CANADA
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
(Baseline)
Mutation Information
Gene, variant, consequence, and exon number:
SEQUENCING WITH A MICROCEPHALY SEQUENCING PANEL REVEALED A PATHOGENIC DOMINANT MUTATION IN FOXG1 GENE: C.490DUP (P.GLU154GLYFS*301); CONFIRMED BY SANGER SEQUENCING
Zygosity:
Heterozygous
Other variants:
BENIGN VARIANT OF UNKNOWN SIGNIFICANCE (VOUS) IN THE FOXG1 GENE: C.376G>A (P.GLY126SER)
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:
5 MONTHS
Age at Diagnosis:
11 YEARS
In Utero History Information
Birth History Information
Dysmorphic Features
Microcephaly
Neurological Symptoms
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Additional Information:
SURGERY: HIP DYSPLASIA
Developmental Milestones
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Additional Information
Testing Performed
Neurological Testing:
IMAGING, EEG
Respiratory and Cardiovascular Testing:
EKG
Uncategorized Testing:
BIOPSY
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Wheelchair or ambulation devices
Orthotics
Communication or learning devices
Additional Testing:
OTHER ASSISTIVE DEVICES - GTUBE, CPAP
Medications
BACLOFEN, LANSOPRAZOLE, DOMPERIDONE
Family History
Remarks
See Phenotypic Data tab.
External Links
Gene Cards
FOXG1
Gene Ontology
GO:0003700 transcription factor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
GO:0007420 brain development
GO:0009653 morphogenesis
NCBI Gene
Gene ID:2290
NCBI GTR
164874 FORKHEAD BOX G1; FOXG1
613454 RETT SYNDROME, CONGENITAL VARIANT
OMIM
164874 FORKHEAD BOX G1; FOXG1
613454 RETT SYNDROME, CONGENITAL VARIANT
Culture Protocols
Split Ratio
1:3
Temperature
37 C
Percent CO2
5%
Percent O2
AMBIENT
Medium
Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum
15% fetal bovine serum Not Inactivated
Substrate
None specified
Subcultivation Method
dilution - add fresh medium
Supplement
-
Pricing
Commercial/For-profit:
$311.00
USD
Academic/Non-profit/Government:
$176.00
USD
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